This function allows you to perform standard sc-ATAC clustering
Usage
ATAC_Wrapper(MTX, res = 0.3, dim1 = 1, dim2 = 20)
Arguments
- MTX
sparse Matrix of class "dgCMatrix", each row is a peak, each column is a cell,
- res
clustering resolution, default=0.5
Value
this returns seurat object with ATAC clustering
Examples
if (FALSE) {
bmmc.filtered.atac <- ATAC_Wrapper(PeakVSCell.filtered.Mtx)
}